review article

Oman Medical Journal [2023], Vol. 38, No. 5: e543 

Use of Artificial Intelligence in Coronary Artery Calcium Scoring

Mia Koponen1, Waqas Anwaar2, Habib-ur-Rahman3, Qasim Sheikh2 and Fouzia Sadiq4*

1School of Medical Sciences, University of Aberdeen, Aberdeen, UK

2Department of Computing, Shifa School of Computing, Shifa Tameer-e-Millat University, Islamabad, Pakistan

3Department of Cardiology, Shifa International Hospital, Islamabad, Pakistan

4Directorate of Research, Shifa Tameer-e-Millat University, Islamabad, Pakistan

article info

Abstract

Coronary artery calcium (CAC) scoring improves traditional risk factor-based coronary heart disease (CHD) risk stratification. Here, the contribution of CAC scoring to a traditional 10-year CHD risk prediction scores and new artificial intelligence methods used to automate CAC scoring were reviewed. Research shows that traditional risk factors tend to overestimate or underestimate the actual risk of CHD, meaning that including CAC score in the risk stratification has potential to reduce over- and undertreatment. The automated CAC scoring methods are shown to be accurate and significantly more time-effective than the commonly used semi-automated method.

Cardiovascular diseases (CVDs) are the leading causes of mortality and morbidity in the world, accounting for almost 18 million deaths representing 31% of global deaths. Heart attack and stroke accounts for 85% of these deaths.1 Coronary atherosclerosis and resulting first episodes of potentially lethal or disabling myocardial infarction events often strike apparently healthy asymptomatic individuals. Therefore, there is a great interest in routine screening, early detection, and primary prevention. Lifestyle modification and pharmacotherapy can lower the incidence of acute events in susceptible individuals. Statins are the main cholesterol-lowering drugs used for primary prevention of CVDs.2 Traditionally, coronary heart disease (CHD) risk is predicted by calculating the risk factor-based score, like Framingham Risk Score (FRS), which focuses on factors like age, sex, smoking, blood pressure, serum cholesterol level, and diabetes. However, there is growing evidence that including coronary artery calcium (CAC) in estimating CHD risk has a significant effect on treatment decisions. Therefore, the first part of the review evaluates the contribution of CAC scoring to a traditional 10-year CHD risk prediction scores.

Coronary arteries are the vessels that supply oxygen-rich blood and nutrients to the heart. Anatomical changes such as narrowing of coronary arteries due to deposition of calcium and other substances like cholesterol obstruct supply of oxygenated blood and nutrients thus causing CHD.3 Fractional flow reserve of a coronary artery in comparison to a hypothetical 100% normal coronary artery reveals the functional/physiological status of a coronary artery after variable calcium and/or cholesterol deposits. A CAC score provides an estimate of the burden of coronary atherosclerosis; hence, it is used for CHD risk stratification.4 To obtain the score, a non-contrast gated cardiac computed tomography (CT) scan is conducted, and areas with calcium are identified and quantified.

Figure 1 shows the CT of the chest with identified calcification which is used to calculate CAC score.5 The score produced may be an Agatston score (reflects the total area of calcium deposits along with the density of calcium), calcium volume score, or relative calcium mass score depending on the method.6 Commonly, CAC scoring requires manual identification of the areas that represent calcification; however, artificial intelligence (AI) enables clinicians to perform multiple tasks like processing on different atlases at the same time with more accuracy and least human error.

Figure 1: Coronary artery calcification detection on CT pulmonary venograms. (a) Mild coronary calcification is seen as a spot of calcification in the proximal left anterior descending artery. (b) Moderate coronary calcification is seen as a bulky calcification in the proximal part of the left anterior descending artery. Another area of calcification is seen in the proximal part of the left circumflex artery. (c) Severe coronary calcification is seen as a very dense and long segment of the proximal and mid-portion of the left anterior descending artery. Additional coronary calcification is seen involving the left main coronary artery.

The second part of the review summarizes methods developed to automate CAC scoring with AI.

Contribution of CAC scoring to traditional 10-year CHD risk prediction scores

CAC has been studied since the 1980s, and several studies have shown that it is effective in estimating CHD risk and is accurate for risk stratification.7–12 CAC scoring prevents overtreatment with lipid lowering drugs.13 Individuals with higher CAC and low-risk factor scores have higher mortality rate than those with low CAC and high-risk factor scores.11,14

The Multi-Ethnic Study of Atherosclerosis (MESA) risk scoring algorithm was developed to study the prevalence of risk factors and progression of subclinical CVDs among multiethnic population. Inclusion of CAC with traditional risk factors in MESA score improves the risk prediction by up to 80%.10 Others, compared MESA-CAC risk score with Reynolds Risk Score and atherosclerotic cardiovascular disease Risk calculator.4 Reynolds Risk Score overestimated the risk prediction for 30% of participants while atherosclerotic cardiovascular disease underestimated the risk for 23% suggesting that inclusion of CAC scores provides more accurate risk stratification.

Use of AI to automate CAC scoring on chest CTs

AI strives to develop mathematical models and algorithms that aim to mimic human intelligence to solve challenging problems. Artificial neural networks, inspired by the biological neural networks in human brains are one of the most influential technologies used to achieve this goal. Each artificial neuron can use its connections to receive and transmit signals to other neurons.

Neural networks have an input and output layer, which may have intermediate layers with connected neurons known as hidden layers. A neural network with multiple hidden layers is called a deep neural network. Whereas a convolutional neural network (CNN, or ConvNet) is a type of deep neural network, frequently used to process images from different domains.

Chest CT scans are often used for routine screening, for example in heavy smokers to detect lung cancer. With AI, information about the cardiovascular system (e.g., through CAC scoring) can easily be obtained at the same time. This is of importance as lung disease patients are also at risk for CVDs.15 Hence, several methods have been developed to automate CAC scoring from chest CT scans. The reviewed methods and their accuracy are summarized in Table 1.

Table 1: Summary of automated coronary artery calcium (CAC) scoring methods and accuracy.

Study, year

Method

Accuracy

Išgum et al,16 2012

Probabilistic coronary calcium map and statistical pattern recognition system

79% for CAC volume

82% for Agatston risk groups

Gonzalez et al,15 2016

Connected component analysis

86% for Agatston scores

Singh et al,17 2018

Convolutional neural network (CNN)

93% for Agatston scores

Sandstedt et al,18 2019

Artificial intelligence-based automatic post-processing software

93% for Agatston score, volume score, and mass score

De Vos et al,19 2019

3D image registration with CNN

93% for CAC

Fischer et al,20 2020

CNN with Long Short-Term Memory

90.3% for CAC

Lee et al,21 2021

Semantic segmentation with deep learning

93% for CAC

Gogin et al,22 2021

Ensemble of 5 CNNs with 3D U-Net model

95.1% for CAC

In one study,16 a probabilistic coronary calcium map and statistical pattern recognition system to automate CAC scoring from chest CT scans. Location, texture, size, and shape features are used to represent CAC lesions. Location features were determined by registering an input image to an atlas image and by extracting the location features from a map of a priori spatial probabilities of CAC. Chest CT scans were registered to create a probability map. The detected CACs were used to obtain CAC volume scores and Agatston scores. Using 231 chest CT scans, the results showed 79% accuracy for CAC volume and 82% accuracy for classifying Agatston risk groups. The sensitivity of their method for CAC volume was 79.2% but only 58.6% sensitivity for Agatston risk groups.

Chest CT scans of 1500 patients were used to automate Agatston scoring.15 Firstly, bones were identified by connected component analysis so that they would not be misidentified as CACs. Secondly, a machine learning-based object detector was used to detect the heart by finding the pulmonary artery and the aorta from the image. Thirdly, the region of interest was defined around the heart. After this, calcified voxels were identified and grouped in connected components to compute Agatston scores [Figure 2]. The results showed 86% agreement with manual Agatston scores.

Figure 2: Computation flow for automating Agatston scoring.15

More recently, research has focused on the use of CNNs in the medical domain which were trained to obtain Agatston scores directly from chest CT scans [Figure 3].17 A database of 5973 chest CT scans with Agatston scores was used, of which 4973 scans were used for training and 1000 scans for testing. The results showed that CNN was able to predict Agatston scores from the test set with 93% accuracy.17

Figure 3: A typical architecture of a convolutional neural network used for medical image processing. Input medical 3D image goes through a series of convolution layers which extracts the convolutional features from previous layers and passes through the subsampling layer which reduces the size of convolutional layers. Flattening layer then converts the convolutional features to single dimension which is further connected to flattening layers via fully connected neurons. Output ( coronary artery calcium for instance) is then achieved in the output layer.17

A study compared AI-based automatic post-processing software for automated CAC scoring and traditional semi-automatic CAC scoring that requires manual calcium identification.18 Three hundred and fifteen chest CT scans were used for both methods to determine Agatston score, the volume score, the mass score, and the number of calcified coronary lesions. The results showed that all outcomes between the automated and semi-automated methods were in ~93% correlation. Additionally, the median time for the automated method was 9 seconds and 59 seconds for the semi-automatic method. The study demonstrates that automatic CAC scoring is equally accurate to semi-automatic scoring and significantly faster.

CAC has higher attenuation differences between lesions. To address this, Lee et al,21 has used coronary CT angiography to generate labeled data. This dataset is used with CAC images for pixel level classification. Finally, the image details are fed into a software (AVIEW CAC, Coreline Soft, Co. Ltd., South Korea) that determines the CAC
score [Figure 4].21

Figure 4: Labels from coronary CT angiography are transferred to coronary artery calcium (CAC) for registration purpose. These registered labels with CAC images are then forwarded to U-Net model.21

A study by de Vos et al,19 proposed a combination of two convolutional networks. One network is used for unsupervised atlas-registration and the second one is used for the calculation of calcium scoring [Figure 5]. Atlas registration CNN is used for image registration to align all the input images in the same 3D space or field of view. This is done by fixing the atlas image and warping the rest of the images available in the dataset by finding the transformation parameters and by interpolation. Calcium scoring CNN predicts the calcium scoring from the image slices.

Figure 5: Image is first registered by Atlas registration Convolutional neural networks (ConvNet) to align the field of view (FOV) which is then fed to calcium scoring ConvNet to find the coronary artery calcium.19

Fischer et al,20 proposed segmentation-based deep learning method (CNN and LSTM) for calcified scoring but this was only 90.3% accurate. Gogin et al,22 proposed an ensemble of five CNNs with 3D U-Net architecture. Each model is built with the depth of four levels having 16 initial filters. They used exponential linear unit as activation function. Residual connection is used in each convolutional layer with batch normalization. A final decision about the classification is made by the majority voting for each voxel (3D pixel) by all the five CNNs, and hence the CAC scoring is around 95% accurate. More recently, Zair et al,23 applied the preprocessing and extraction model prior to the segmentation of 3D heart. The whole process, as shown in Figure 6, estimates CAC score with an accuracy of 99%.

Figure 6: Pre-treatment phase - image volume is passed through preprocessing step in which Region of interest (ROI) is extracted in the form of 3D bounding box. During binary classification for CAC segmentation, ROI is classified if it is CAC or not. If it is CAC classified, then in the next phase it is further classified into the specified class where
it belongs.23

Conclusion

Cardiovascular risk assessment can be improved using CAC scoring and AI. CAC score enhances risk stratification with traditional risk factors and the CAC score on its own is effective in predicting CHD risk.24,25 Traditional risk factors tend to overestimate or underestimate the actual CHD risk, meaning that including CAC score in risk stratification has a potential to reduce over- and undertreatment. Furthermore, several methods have been developed to automate CAC scoring. These methods are shown to be accurate and significantly more time effective compared to non-AI-based methods that required a lot of human efforts; however, more studies are required for cost and benefit analyses of automating CAC. Further research is recommended in investigating the effect of CAC score in reducing over- and undertreatment. Larger datasets are required for deep-learning systems (i.e., to evaluate the methods for coronary artery segmentation and calculation of CAC). Statistical parameters such as sensitivity, specificity, precision, recall, and F1 score need to be defined and for this purpose, several studies are required. Taken together, automated CAC scoring using deep-learning system coupled with electronic medical records can help clinicians identify patients at high risk in time-efficient manner.

Disclosure

The authors declared no conflicts of interest. No funding was received for this study.

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